Genome annotations

JA Johannes Alneberg
CB Christin Bennke
SB Sara Beier
CB Carina Bunse
CQ Christopher Quince
KI Karolina Ininbergs
LR Lasse Riemann
ME Martin Ekman
KJ Klaus Jürgens
ML Matthias Labrenz
JP Jarone Pinhassi
AA Anders F. Andersson
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Genes were predicted in the MAGs with Prodigal (v.2.6.3), running the program on each MAG separately in default single genome mode. Functional annotation of genes were conducted using eggNOG mapper version 1.0.369. Gene profiles were obtained by counting the number of occurence of each eggNOG with a “@NOG” suffix in each genome. In total 35,593 such unique eggNOGs were found, of which 4115 were COGs. The gene profile of a BACL was calculated by taking the average of the gene profiles of the MAGs in the BACL. Pairwise dissimilarities of gene profiles between BACLs were calculated using Spearman rank correlations, where the gene profile dissimilarity = (1 − ρ)/2, and where ρ is the Spearman correlation coefficient.

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