Bioinformatics and gene ontology analysis

LR Lucy Remnant
DB Daniel G. Booth
GV Giulia Vargiu
CS Christos Spanos
AK Alastair R. W. Kerr
WE William C. Earnshaw
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Final hit lists from both conditions were run through the g-Profiler toolkit (Reimand et al., 2016 blue right-pointing triangle) and the significant terms (P < 0.01) for each sample were recorded in the output. This was then used to calculate log2 enrichment for each gene ontology (GO) term using the fraction of these terms per sample against the ratio of these terms in the database used by g-Profiler.

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