2.3. Exploration through Semi-Quantitative PCR

QK Qudratullah Kalwar
AA Anum Ali Ahmad
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The semi-quantitative PCR reaction for characterization of SYCP3 and TSEG2 in different tissues comprised a total of 162.5 µL Taq PCR master mixture, 13 µL each primer (forward and reverse), and ddH2O 123.5 µL after that reaction mixture were divided into 24 µL aliquots into 11 tubes. Additionally, cDNA obtained from ten kinds of tissues was used, 1 µL of the cDNA was added into the ten tubes, and one tube as a control. The reaction was conducted according to Yan et al. [22]. The PCR was implemented using the different conditions: for 3 min at 94 °C; followed by 30 cycles of 94 °C for 30 s, annealing at 60 °C (for GAPDH, SYCP3 and TSEG2) for 30 s, and 72 °C for 1 min; and extension at 72 °C for 5 min. The reaction products were visualized on 1 % agarose gel stained with ethidium bromide.

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