For electron microscopy, M. magneticum cells were concentrated by centrifugation (5000 rpm, 5 min, 4°C), adsorbed onto a cooper grid, rinsed once with buffer (10 mM Hepes, 5 mM EDTA) and once with distilled water. The samples were imaged using a Zeiss 912 Omega transmission electron microscope at 120 kV.
The transmission electron microscopy images were analyzed with “ImageJ” in order to determine the size of magnetosomes, their amount per cell and the cell length (Supplementary Figures S2B–F). The magnetosomes dimensions were estimated by calculating the best fit of ellipse to the contours (Devouard et al., 1998).
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