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2.7. Estimation of Synonymous and Non-Synonymous Substitution Rates

PW Patrick C. Y. Woo
JT Jade L. L. Teng
SL Susanna K. P. Lau
KY Kwok-Yung Yuen
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The number of synonymous substitutions per synonymous site, Ks, and the number of non-synonymous substitutions per non-synonymous site, Ka, for the RdRp between monkey PBVs belonging to clade M-R1 were calculated using the Nei-Gojobori method (Jukes-Cantor) in MEGA6 [30]. The Ks and Ka for the other two clades of monkey PBVs were not calculated because the number of sequences was small.

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Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).

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