Data analysis was performed as previously described in detail [19, 83]. Briefly, in the first round (whole genome) screen, for each well, a mean value for the GFP/TOF ratios for each worm was calculated. From these values, for each plate, a truncated mean (discarding the 25 % lowest and the 25 % highest values) was calculated and used to normalize the average GFP/TOF values for the individual wells, to allow across-plate comparison. Normalized values for TOF (TOF/[truncated mean of TOF]) and dsRed ((dsRed/TOF)/[truncated mean of dsRed/TOF]) were similarly calculated. Details of Nipi clone selection after the second round of screening are given in Supplementary Methods.
Do you have any questions about this protocol?
Post your question to gather feedback from the community. We will also invite the authors of this article to respond.
Tips for asking effective questions
+ Description
Write a detailed description. Include all information that will help others answer your question including experimental processes, conditions, and relevant images.