Relative Gene Expression Analysis by qPCR In Vitro

SY Sorah Yoon
KH Kai-Wen Huang
PA Pinelopi Andrikakou
DV Daniel Vasconcelos
PS Piotr Swiderski
VR Vikash Reebye
MS Mikael Sodergren
NH Nagy Habib
JR John J. Rossi
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For analyzing gene activation and protein expression, PANC-1 cells were seeded in duplicate into 24-well plates at a density of 1 × 105 cells/well. TR14 or control aptamer (IRRE) conjugated to C/EBPα-saRNAs was added directly to the cells, at a final concentration of 100 nM. The treatment was repeated 24 h later, and cells were harvested at final incubation times of 72 h. Total RNA was extracted for reverse transcription using an RNeasy kit (QIAGEN). Target cDNA amplification and real-time PCR were performed using a Bio-Rad kit (SsoAdvanced Universal SYBR Green Supermix). For normalization, the reference gene 18S was used.

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