Isolation of Primary Mouse Hepatocytes, RNA Isolation, and Quantitative Real-Time PCR (qPCR)

CR Christiane Rennert
SV Sebastian Vlaic
EM Eugenia Marbach-Breitrück
CT Carlo Thiel
SS Susanne Sales
AS Andrej Shevchenko
RG Rolf Gebhardt
MM Madlen Matz-Soja
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The primary hepatocytes were isolated from male C57BL/6N mice, treated like explained above. Isolation was performed by a collagenase perfusion technique as described before (Gebhardt et al., 2003). The cell suspension was cleared of non-parenchymal cells by differential centrifugation steps (Matz-Soja et al., 2014). Pure hepatocyte fraction was used for further procedures.

Total RNA from hepatocytes was extracted using RNeasy® Mini Kit (Qiagen, Hilden) and the quality was controlled by agarose gel electrophoresis. The reverse transcription was performed with the Proto Script M-MuLV First Strand cDNA Synthesis Kit (New England Biolabs). Gene expression quantification by qPCR was performed in duplicates using the Rotor-Gene SYBR® Green PCR Kit and a Rotor-Gene Q (Qiagen). Gene specific intron-spanning primers were designed with Primer 3 software and are listed in Supplementary Table 1. The specific qPCR products were quantified using internal amplification standards; 18S was used as reference gene. Values are plotted as average of biological replicates (n = 3) ± standard deviation. The statistical evaluation was performed with the unpaired Student’s t-test (GraphPad Prism 7). The null hypothesis was rejected at p < 0.05, ∗∗p < 0.01, and ∗∗∗p < 0.001 levels.

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