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Gene structure and conserved motif analysis

XL Xihua Li
GL Guoyuan Liu
YG Yanhui Geng
MW Man Wu
WP Wenfeng Pei
HZ Honghong Zhai
XZ Xinshan Zang
XL Xingli Li
JZ Jinfa Zhang
SY Shuxun Yu
JY Jiwen Yu
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The gene exon/intron structure was analyzed using the Gene Structure Display Server (GSDS) [39] by comparing the cDNAs with their corresponding genomic DNA sequences. The Multiple Em for Motif Elicitation (MEME; version 4.11.2) program was used to analyze the protein sequences of the four cotton species G. raimondii, G. arboreum, G. hirsutum, and G. barbadense designated GrSAURs, GaSAURs, GhSAURs, and GbSAURs, respectively. The following parameter settings were used: size distribution, zero or one occurrence per sequence; motifs count, 5; and motif width, between 6 and 37 wide.

Copyright and License information: The Author(s). ©2017
Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.

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