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Data Acquisition from the GEO Repository

CE Cailing E
RW Rongying Wang
ZM Zudong Meng
YZ Yulin Zou
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The Gene Expression Omnibus (GEO) database, a comprehensive gene expression resource, is curated and sustained by the National Center for Biotechnology Information (NCBI). Researchers can access the dataset GSE151177, which contains 18 samples for single-cell analysis, directly from the GEO public database.

For a broader scope of research, the Series Matrix File of GSE41664 is also available on GEO. Analysis of this file, denoted as GPL570, includes gene expression profiles from a total of 157 patients, categorized into 53 control individuals and 104 patients with the disease under study.

Additionally, the Series Matrix File for GSE30999 can be downloaded from GEO. This file, also labeled as GPL570, contains the expression profiles of 170 patients, evenly divided with 85 individuals in the control group and an equal number in the disease group. This balanced cohort facilitates comparative analysis, crucial for identifying disease-specific gene expression patterns.

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