PARP1 trapping assay

NR Natasha Ramakrishnan
TW Tyler M. Weaver
LA Lindsey N. Aubuchon
AW Ayda Woldegerima
TJ Taylor Just
KS Kevin Song
AV Alessandro Vindigni
BF Bret D. Freudenthal
PV Priyanka Verma
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The PARP1 trapping experiment was performed as described before49. Briefly, 3000 cells were plated on a poly-l-lysine-coated eight-well chamber slide. After 5 days, cells were either treated with 10 µM olaparib or 10 µM olaparib and 0.2 mM MMS for 4 h. Cells were pre-extracted on ice with 0 PBS supplemented with 0.2% Triton X-100, h 1 µM PARGi (PDD, Fisher, cat. no. 59-521-0) and 10 µM olaparib, for 5 min. Cells were then fixed with 3% PFA, supplemented with 1 µM PARGi and 10 µM olaparib, for 20 min at room temperature. Cells were permeabilized with 0.5% Triton X-100 in PBS for 5 min on ice, then washed with PBS. Blocking was performed for 1 h at room temperature with 0.22 µ-filtered DMEM containing 10% FBS. Cells were incubated with 1:500 dilution of rabbit anti-PARP (Abcam, ab227244) for 1 h at room temperature, followed by washes with 0.02% PBS-Tween. Cells were next incubated with 1:500 dilution of Alexa-Fluor 488 conjugated anti-rabbit secondary (Thermo, A32766) for 1 h at room temperature. Finally, the chamber gasket was removed, and a coverslip was mounted using Prolong Diamond Antifade mounting media with DAPI (Thermo, P36962). All images were acquired on a Nikon Ti-2 using a 20x objective.

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