Statistical Analysis

MT Matt Trinh
NE Natalie Eshow
DA David Alonso-Caneiro
MK Michael Kalloniatis
LN Lisa Nivison-Smith
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Statistical analyses were performed with GraphPad Prism version 9.3.1, SPSS Version 25, and Microsoft Excel Version 2203. Statistical significance was considered as P < 0.05. Continuous values were expressed as mean (95% CI) unless otherwise specified. Non-continuous variables, for example, sex, presence of pigmentary abnormalities, and study group, were dummy-coded for regression analyses.86 Normality was assessed using the D'Agostino-Pearson test. Thicknesses (by grid or cluster) were derived from each participant as a single unit of observation (i.e. independent data). Hence, single comparisons of continuous data between groups used unpaired Student's t-test or Mann-Whitney U test depending on normality. As each comparison was individually important, there was no statistical adjustment for multiple comparisons (within each individual retinal layer) and instead results were considered contextually.87 Multiple comparisons of continuous data between groups used one-way ANOVA and Tukey's multiple comparisons test. Comparisons of continuous data within groups (i.e. between clusters within each individual retinal layer) used paired t-test or mixed-effects repeated measures model with non-assumption of sphericity (equal variability of differences and Geisser-Greenhouse correction) and Holm-Sidak's multiple comparisons test, depending on number of comparisons. Comparisons of categorical data used χ2 test. Comparisons of paired proportions (i.e. between clusters subdivided into quadrants and/or central, peri-central, para-central, peripheral, and extra-macula) used McNemar's and Cochran's Q tests.88 Effect sizes (Z-scores) were interpreted according to Cohen et al.89 ≥0.2 = small, ≥0.5 = medium, and ≥0.8 = large.

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