Gene ontology and KEGG gene set enrichment analyses

SH Sophie A. Herbst
MV Mattias Vesterlund
AH Alexander J. Helmboldt
RJ Rozbeh Jafari
IS Ioannis Siavelis
MS Matthias Stahl
ES Eva C. Schitter
NL Nora Liebers
BB Berit J. Brinkmann
FC Felix Czernilofsky
TR Tobias Roider
PB Peter-Martin Bruch
MI Murat Iskar
AK Adam Kittai
YH Ying Huang
JL Junyan Lu
SR Sarah Richter
GM Georgios Mermelekas
HU Husen Muhammad Umer
MK Mareike Knoll
CK Carolin Kolb
AL Angela Lenze
XC Xiaofang Cao
Cecilia Österholm
LW Linus Wahnschaffe
CH Carmen Herling
SS Sebastian Scheinost
MG Matthias Ganzinger
LM Larry Mansouri
KK Katharina Kriegsmann
MK Mark Kriegsmann
SA Simon Anders
MZ Marc Zapatka
GP Giovanni Del Poeta
AZ Antonella Zucchetto
RB Riccardo Bomben
VG Valter Gattei
PD Peter Dreger
JW Jennifer Woyach
MH Marco Herling
CM Carsten Müller-Tidow
RR Richard Rosenquist
SS Stephan Stilgenbauer
TZ Thorsten Zenz
WH Wolfgang Huber
ET Eugen Tausch
JL Janne Lehtiö
SD Sascha Dietrich
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Enrichment analysis was performed against KEGG gene sets59 using GSEA (version 4.0.3)56. For GO term enrichment60 of proteins loaded onto latent factor 9 the MOFA33 internal function runEnrichmentAnalysis was used. The required GO terms were downloaded from MSigDB61 (v7.0) and the FDR cut-off was set to >5%.

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