Cellular thermal shift assay (CETSA)

MW Marius Walter
IC Irene P. Chen
AV Albert Vallejo-Gracia
IK Ik-Jung Kim
OB Olga Bielska
VL Victor L. Lam
JH Jennifer M. Hayashi
AC Andrew Cruz
SS Samah Shah
FS Frank W. Soveg
JG John D. Gross
NK Nevan J. Krogan
KJ Keith R. Jerome
BS Birgit Schilling
MO Melanie Ott
EV Eric Verdin
AP Andrew Pekosz
MD Meike Dittmann
AP Andrew Pekosz
MD Meike Dittmann
AP Andrew Pekosz
MD Meike Dittmann
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CETSA was performed as described [66]. Shortly, HEK-293T cells in six wells were transfected with plasmids expressing Nsp14-strep and/or SIRT5. After 48 hours, cells were harvested, washed with PBS, and resuspended in PBS supplemented with EDTA-free complete protease inhibitor cocktail (Roche). Intact cells were divided into 100-μl aliquots and heated individually at different temperatures for 3 minutes in a PCR machine (Biorad), followed by cooling for 2 minutes at room temperature. Cell suspensions were freeze-thawed three times with liquid nitrogen, and the soluble fraction was separated from the cell debris by centrifugation at 20,000 × g for 20 minutes at 4°C. Supernatants containing soluble proteins were transferred to new microcentrifuge tubes and analyzed by western blot.

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