Oxygen consumption rate assay

YS Yogesh Sutar
SN Sunna Nabeela
SS Shakti Singh
AA Abdullah Alqarihi
NS Norma Solis
TG Teklegiorgis Ghebremariam
SF Scott Filler
AI Ashraf S. Ibrahim
AD Abhijit Date
PU Priya Uppuluri
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OCR were measured under a Seahorse instrument (Seahorse Bioscience, Massachusetts, USA) according to the manufacturer’s instructions. Cells were plated in poly-d-lysine-coated XF96 microplates at a density of 5 × 104 cells/well in 100 μL volume of unsupplemented DMEM (no glucose) with or without NCL-EPO-NP. Samples were run with 3 technical replicates per condition. The plates were centrifuged at 1,000 rpm for 4 minutes without use of the centrifuge break. After centrifugation, plate was incubated for 5 minutes before being loaded into a Seahorse XF96 Extracellular Flux Analyzer (Agilent). Basal respiration was measured over 6 hours with 36 ten-minute protocol cycles including a 3-minute mix, 4-minute wait, and 3-minute measurement. After 6 hours, the Complex I and Complex III electron transport chain inhibitors rotenone and antimycin A were injected from Ports A and B at a final concentration of 5 μM to determine nonmitochondrial respiration. Data analysis included subtraction of nonmitochondrial respiration from basal respiration measurements before averaging the last 4 basal measurements.

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