Immgen analysis of gene sets

NG Naomi Goldman
AC Aditi Chandra
IJ Isabelle Johnson
MS Matthew A. Sullivan
AP Abhijeet R. Patil
AV Ashley Vanderbeck
AJ Atishay Jay
YZ Yeqiao Zhou
EF Emily K. Ferrari
LM Leland Mayne
JA Jennifer Aguilan
HX Hai-Hui Xue
RF Robert B. Faryabi
EW E. John Wherry
SS Simone Sidoli
IM Ivan Maillard
GV Golnaz Vahedi
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Expression values of gene sets were plotted across a curated list of 62 immune cell types. Normalized gene counts were downloaded from immgen (GSE109125_Normalized_Gene_count_table.csv). For gene sets of interest, scaled expression values were calculated by subtracting the mean and dividing by the standard deviation of each gene across all cell types.

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