2.9. Reverse transcription quantitative polymerase chain reaction (RT–qPCR)

SY Shiyao Yang
JG Jing Gao
MC Meng Chen
YS Yuting Sun
XQ Xin Qiao
HM Hongchen Mao
LG Li Guo
YY Yang Yu
DY Deqin Yang
request Request a Protocol
ask Ask a question
Favorite

TRIzol reagent (Invitrogen) was used to extract total RNA from BMMSCs. With a TaKaRa PrimeScript RT Reagent Kit from TaKaRa, cDNA was produced by reverse transcription of RNA. The reverse‐transcribed cDNA products were diluted with 10 μL of DEPC water. Followed‐up PCR reaction was conducted by a SYBR® Premix Ex TaqTM (Perfect Real Time) kit (TaKaRa). The following settings were used to conduct the reactions: 95°C for 15 s (40 cycles), 60°C for 35 s; 72°C for 30 s; 65°C for 15 s; 95°Cfor 0 s, 0.5°C/s. Table 1 lists the amplification primer sequences.

Primer sequences for real time‐polymerase chain reaction.

F 5′‐GGACCATTCCCACGTCTTCAC‐3′

R 5′‐CCTTGTAGCCAGGCCCATTG‐3′

F 5′‐GCACCCAGCCCATAATAGA‐3′

R 5′‐TTGGAGCAAGGAGAACCC‐3′

OSX

F 5′‐GCCTACTTACCCGTCTGACTTT‐3′

R 5′‐GCCCACTATTGCCAACTGC‐3′

Col‐1

F 5′‐TTCCCGGTGAATTCGGTCTC‐3′

R 5′‐ACCTCGGATTCCAATAGGACCAG‐3′

Fibronectin

F 5′‐CCAGTTAGGGTTGGCGTCTTC‐3′

R 5′‐GCTGGTCCATGCTCAGAGTGTC‐3′

Integrin β1

F 5′‐CCGCGCGGAAAAGATGAATTT‐3′

R 5′‐AGCAAACACACAGCAAACTGA‐3′

Beclin

F 5′‐CAGTACCAGCGGGAGTATAGTGA‐3′

R 5′‐TGTGGAAGGTGGCATTGAAGA‐3′

LC3

F 5′‐CCTGTCCTGGATAAGACCAAGTT‐3′

R 5′‐CTCCTGTTCATAGATGTCAGCGAT‐3′

Fas

F 5′‐TTCCCATCCTCCTGACCAC‐3′

R 5′‐CTCGTAAACCGCTTCCCTC‐3′

FasL

F 5′‐ATTGGCACCATCTTTACTTACC‐3′

R 5′‐CTCCTTAGAATCTGCTCTCATA‐3′

let‐7a

F 5′‐GTGTATCATACAGTATAATGAAACTAC‐3′

R 5′‐AACAGTGCAGTTAGTTCT‐3′

GAPDH

F 5′‐GGCACAGTCAAGGCTGAGAATG‐3′

R 5′‐ATGGTGGTGAAGACGCCAGTA‐3′

Do you have any questions about this protocol?

Post your question to gather feedback from the community. We will also invite the authors of this article to respond.

0/150

tip Tips for asking effective questions

+ Description

Write a detailed description. Include all information that will help others answer your question including experimental processes, conditions, and relevant images.

post Post a Question
0 Q&A