Benchmarking analysis was performed in R 4.0.2 [46], and MicrobIEM analysis of the skin microbiome dataset was performed in version 0.7 (https://github.com/LuiseRauer/MicrobIEM). Analysis scripts are available on Github for benchmarking of the mock communities (https://github.com/LuiseRauer/Decontamination_benchmarking) and at the Open Science Framework (OSF) platform for benchmarking of the skin microbiome dataset (https://osf.io/yn9sa/).
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