Global Distance Test (GDT-TS) scores.

EL Ethan H. Li
LS Laura E. Spaman
RT Roberto Tejero
YH Yuanpeng Janet Huang
TR Theresa A. Ramelot
KF Keith J. Fraga
JP James H. Prestegard
MK Michael A. Kennedy
GM Gaetano T. Montelione
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GDT_TS scores were computed using backbone Cα atoms within the Comparison Residue Ranges, using the representative medoid model [27, 38] of the NMR model ensemble and the first-ranked AF2 model from the set of prediction models, by the method of Zemla [39], using the TMScore program [40] (downloaded from https://zhanggroup.org/TM-score/), as

Here, P1,P2,P4, and P8 are the percent of residues with backbone Cα RMSD’s < 1 Å, < 2Å, < 4 Å, and < 8 Å, respectively, for consensus reliably modeled / well-define residue ranges of the superimposed structure pairs. GDT_TS=100% would mean that all reliably-modeled residues superimpose with backbone Cα RMSD < 1 Å; while GDT_TS of 50% corresponds to an average backbone RMSD of about 4 Å. For brevity, GDT_TS scores are referred to throughout this paper as GDT scores and are reported as real numbers between 0 (0%) and 1.0 (100%).

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