In total, 299 publicly available RNA-seq libraries for P. patens were downloaded from EMBL ENA service. With the 74 RNA-seq libraries produced in this study, 373 libraries were analyzed in total.
Raw data were quality-checked using FastQ83 and trimmed to remove adapter contamination and reads of poor quality using Trimmomatic84.
Do you have any questions about this protocol?
Post your question to gather feedback from the community. We will also invite the authors of this article to respond.