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Chromosomal Distribution and Duplication Analysis
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Combining rice gene location information, all family members of OsSUBs were mapped to their corresponding chromosomes. Moreover, we focused on SUB tandem duplication and collinearity events. We conducted self-BLAST using whole-protein files from rice (E-value = 1e-3; number of His = 10), and the gene location data were analyzed using MCScanX.7 To compare the tandem duplication (TD) status of SUBs in the Oryza species, we manually analyzed each genome.
Copyright and License information: ©2022 Zheng, Pang, Xue, Gao, Zhao, Wang and Han.
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