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2.4. In silico analysis of GadB structure

KP K. Pokusaeva
CJ C. Johnson
BL B. Luk
GU G. Uribe
YF Y. Fu
NO N. Oezguen
RM R. K. Matsunami
ML M. Lugo
AM A. Major
YM Y. Mori‐Akiyama
EH E. B. Hollister
SD S. M. Dann
XS X. Z. Shi
DE D. A. Engler
TS T. Savidge
JV J. Versalovic
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Sequence data were obtained from the non‐redundant sequence database accessible at the National Center for Biotechnology Information website (http://www.ncbi.nlm.nih.gov). The genome sequence of B. dentium ATCC 27678 (accession number: ABIX02000002.1) in combination with Artemis Informatics Software (Wellcome Trust Sanger Institute) was used for genome resource, display, and analysis. BLAST searches were performed using the National Center for Biotechnology Information website. Sequence analysis was performed using the VectorNTI software package. GadB 3D structure modeling was achieved by means of Phyre2 software (http://www.sbg.bio.ic.ac.uk/phyre2/html/page.cgi?id=index). Visualization file was generated with Molmol.46

Copyright and License information:  ©2016 The Authors. Neurogastroenterology & Motility Published by John Wiley & Sons Ltd.
This is an open access article under the terms of the Creative Commons Attribution‐NonCommercial‐NoDerivs License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.

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