MRI Scans Acquisition and Quantification

MM Marta Milà-Alomà
AB Ann Brinkmalm
NA Nicholas J. Ashton
HK Hlin Kvartsberg
MS Mahnaz Shekari
GO Grégory Operto
GS Gemma Salvadó
CF Carles Falcon
JG Juan Domingo Gispert
NV Natalia Vilor-Tejedor
EA Eider M. Arenaza-Urquijo
OG Oriol Grau-Rivera
AS Aleix Sala-Vila
GS Gonzalo Sanchez-Benavides
JG José María González-de-Echávarri
CM Carolina Minguillon
KF Karine Fauria
AN Aida Niñerola-Baizán
AP Andrés Perissinotti
GK Gwendlyn Kollmorgen
IS Ivonne Suridjan
HZ Henrik Zetterberg
JM José Luis Molinuevo
KB Kaj Blennow
MS Marc Suárez-Calvet
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MRI scans were obtained with a 3T scanner (Ingenia CX, Philips, the Netherlands) at the neuroimaging unit at Barcelonaβeta Brain Research Center. The MRI protocol was identical for all participants and included a high-resolution 3-dimensional T1-weighted turbo field echo sequence (voxel size 0.75 × 0.75 × 0.75 mm3, repetition time/echo time 9.90/4.6 milliseconds, flip angle 8°).

T1-weighted images were automatically segmented, and cortical thickness was measured in the regions from the Desikan-Killiany cortical atlas using FreeSurfer version 6.0.35 Segmentation results were visually quality controlled by an expert. The cortical AD signature was then estimated for each participant from the thickness of the following areas: entorhinal, inferior temporal, middle temporal, and fusiform. The signature was calculated as the mean thickness across these regions weighted by their surface area, as previously proposed.36,37 Cortical thickness was calculated for the whole signature and for all the individual regions.

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