Calculation of cycle threshold (Ct) and threshold time (Tt) values

JS Jonas Schmidt
SB Sandro Berghaus
FB Frithjof Blessing
FW Folker Wenzel
HH Holger Herbeck
JB Josef Blessing
PS Peter Schierack
SR Stefan Rödiger
DR Dirk Roggenbuck
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The cycle threshold (Ct) values of the RT-PCR assays were calculated from the background corrected amplification curves using the Roto-Gene Q Software [V2.3.5] (Qiagen, Hilden, Germany) or the LightCycler 96 Software [V.1.1.0.1320] (Roche, Basel, Switzerland). Amplification curves from the RT-LAMP were analysed using an identical procedure. As LAMP is an isothermal amplification technique, the reaction time when the fluorescence signal exceeds the threshold is referred to as threshold time (Tt) value.

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