For the coimmunoprecipitation assay of MA-104 cells infected with RVA-NMTL, the cells were seeded in 75-cm2 bottles (catalog number 430720; Corning) and then infected with RVA-NMTL at an MOI of 0.1 for 18 h. The control cells were not infected. The cells were then lysed with 1 ml of Pierce immunoprecipitation (IP) lysis buffer (catalog number 87788; Thermo Scientific) containing phenylmethylsulfonyl fluoride (catalog number ST506; Beyotime) and a protease inhibitor (catalog number 4693132001; Roche) for 30 min at 4°C and centrifuged at 12,000 × g for 5 min at 4°C. An aliquot (80 μl) of the supernatant was boiled with 20 μl of 5× SDS-PAGE protein loading buffer. To avoid nonspecific reactions, the remaining supernatant was shaken with protein A/G magnetic beads (catalog number UI287210A; Thermo) and negative mouse IgG (catalog number A7028; Beyotime) for 2 h at 4°C. The beads were removed, and the supernatant was shaken overnight with a mouse anti-DIC monoclonal antibody (catalog number ab23905; Abcam) at 4°C. Protein A/G magnetic beads were added, and the samples were shaken again at 4°C for 4 h. The beads were washed five times with Pierce IP lysis buffer and boiled in 5× SDS-PAGE protein loading buffer. All the samples were analyzed by Western blotting, as described above. For the coimmunoprecipitation assay in HEK-293T cells, the cells were transfected with plasmids pCMV-Myc-DIC and pCAGGS-HA-NSP2 for 48 h, as described above. The control group of cells was cotransfected with pCMV-Myc-DIC and pCAGGS-HA, pCMV-Myc-DIC and pCAGGS-HA-NSP5, pCMV-Myc and pCAGGS-HA-NSP2, or pCMV-Myc and pCAGGS-HA-NSP5. The remaining procedures were the same as those described above for the MA-104 cells but with a mouse anti-Myc monoclonal antibody (catalog number M4439; Sigma) instead of the mouse anti-DIC monoclonal antibody.
Do you have any questions about this protocol?
Post your question to gather feedback from the community. We will also invite the authors of this article to respond.