Real-time Quantitative PCR

QT Qiang Tong
MW Michael R. Weaver
EK Elizabeth A. Kosmacek
BO Brian O’Connor
LH Laura Harmacek
SV Sujatha Venkataraman
RO Rebecca E. Oberley-Deegan
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RNA was isolated from PC3 cells with the ZR RNA MicroPrep RNA isolation kit (Zymo Research) according to the manufacturer’s protocol. For quantitative analysis of mRNA expression, comparative real-time PCR was performed with the use of Power SYBR Green RNA-to-CT 1 step kit (Applied Biosystems). Quantitative PCR was performed under the following conditions: 48 °C for 30 min, 95 °C for 10 min, then 40 cycles with 95 °C for 15 sec and 60°C for 1 min. Following the final cycle, the melt curves of the PCR products were determined to verify the integrity of the PCR products. The sequences for the amplification of human PAI-1 were: 5′-ACCGCAACGTGGTTTTCTCA-3′ (forward) and 5′-TTGAATCCCATAGCTGCTTGAAT-3′ (reverse). The sequences for the amplification of human TGFβ2 were: 5′-CAGCACACTCGATATGGACCA-3′ (forward) and 5′-CCTCGGGCTCAGGATAGTCT-3′ (reverse). The sequences for the amplification of human FGF1 were: 5′-ACACCGACGGGCTTTTATACG-3′ (forward) and 5′-CCCATTCTTCTTGAGGCCAAC-3′ (reverse). 18S rRNA was used as an external endogenous standard. The forward, 5′-CGGCTACATCCAAGGAA-3′, and reverse, 5′-GCTGGAATTACCGCGGCT-3′.

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