2.4. Dimension Reduction using Partial Least Squares

MY Michael T. Young
MB Matthew J. Bechle
PS Paul D. Sampson
AS Adam A. Szpiro
JM Julian D. Marshall
LS Lianne Sheppard
JK Joel D. Kaufman
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Due to the large number of correlated geographic variables, we used a dimension reduction technique to simplify the model selection process. We chose partial least squares (PLS) because it is specifically designed to deal with large sets of collinear variables and maximizes covariance between the predictors and outcome while minimizing overfitting via dimension reduction.15 Incorporating PLS regression into the prediction approach both avoids overfitting of models, and most effectively chooses predictors from a high dimensional geographic database.15 We performed PLS separately for each modeling year. We considered models including the first 2, 3, 4, and 5 PLS components, and then selected the optimal number of PLS components via cross-validated performance as described in section 2.7.

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