Thermal Shift Assay

IA Ilona van Alen
AC Aleksandra Chikunova
AS Adil A. Safeer
MA Misbha Ud Din Ahmad
AP Anastassis Perrakis
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Thermal shift assays (TSAs) were performed using a CFX96 Touch Real-Time PCR detection system (Bio-Rad). Protein samples were diluted to a final concentration of 15 μM and mixed with 4× SYPRO Orange Protein Gel Stain (diluted from a 5000× stock as supplied by Sigma-Aldrich) to detect protein unfolding. The temperature (T) was increased from 20 to 80 °C in steps of 1 °C, and samples were incubated for 1 min at each temperature before detection of the fluorescence signal. Six-fold measurements were performed. Data were analyzed using OriginPro version 9.1 (OriginLab) and fit using eq 1.

where Tm is the melting temperature in degrees Celsius, A1 and A2 are the initial and final values of fluorescence, respectively, and dT describes the steepness of the change in fluorescence upon unfolding and is thus a measure of the degree of cooperativity.

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