2.8. ELISA‐based global genomic DNA methylation quantification

DG Dhananjay Gotarkar
TL Toshisangba Longkumer
NY Naoki Yamamoto
AN Amrit Kaur Nanda
TI Tamara Iglesias
LL Lin‐Feng Li
BM Berta Miro
EG Elisa Blanco Gonzalez
MB Maria Montes Bayon
KO Kenneth M. Olsen
YH Yue‐Ie Caroline Hsing
AK Ajay Kohli
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Global DNA methylation was quantified as the percentage relative to control methylated DNA by using the anti‐5mC antibody from Imprint@ Methylated DNA Quantification Kit as per manufactures instructions manual supplied with the kit (Sigma–Aldrich; Catalog number—MDQ1). Three biological and three technical replicates for each sample were used. The environmental error which may occur without enough replicates was normalized. To calculate methylation levels relative to the control methylated DNA sample, the following formula was applied: [(A 450 av Sample − A 450 av Blank)/(A 450 av Methylated Control DNA − A 450 av Blank)] × 100 where the A450 av represent the averages of the blank, the sample and the methylated control DNA replicates.

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