2.8. Electrophoretic Mobility Shift Assay (EMSA)

FS Fat-Moon Suk
CC Chi-Ching Chang
PS Pei-Chi Sun
WK Wei-Ting Ke
CC Chia-Chen Chung
KL Kun-Lin Lee
TC Tze-Sian Chan
YL Yu-Chih Liang
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The nuclear proteins and 32P-labeled double-stranded NF-κB oligonucleotide probe were prepared as described previously [28]. Briefly, nuclear proteins were incubated with the probe at room temperature for 20 min, and the probe/protein complex was separated on 6% non-denaturing acrylamide gels. After electrophoresis, the gels were dried by dry-heat vacuum method and the bands were visualized by autoradiography. Sequences of the WT and mutant NF-κB oligonucleotides were 5′-AGTTGAGGGGACTTTCCCAGGC-3′ and 5′-AGTTGAGGGGACTTTCCCAGGC-3′, respectively (the consensus sequence and binding site for NF-κB complexes are underlined).

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