Mtb cells (OD600 = 1.0) were incubated with BDQ (0.35 μM) and DCCD (100 μM) along with the control (DMSO) for 3 h, and equal volumes of cells from all samples in triplicates were then taken and centrifuged at 6,000 rpm (6,641 rcf) for 5 min, followed by washing of cells with Tris-EDTA (TE) buffer. Five hundred microliters of TE buffer was added to the bacterial pellets. Cells were then lysed with a bead beater (8 cycles, with each consisting of a 30-s pulse at a speed of 6.5 m/s2 followed by a 5-min incubation at ice). The cell lysate was centrifuged at 10,000 rpm (9,384 rcf) for 10 min. ATP was estimated using an ATP bioluminescence assay kit (catalogue no. 11699695001; CLS II) according to the manufacturer’s instructions. Briefly, 50 μl of the supernatant was mixed with reaction buffer containing luciferase in 96-well plates, and bioluminescence was measured. Data were plotted using GraphPad Prism software.
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