VLP purification and quantification

KI Kaushik Inamdar
FT Feng-Ching Tsai
RD Rayane Dibsy
AP Aurore de Poret
JM John Manzi
PM Peggy Merida
RM Remi Muller
PL Pekka Lappalainen
PR Philippe Roingeard
JM Johnson Mak
PB Patricia Bassereau
CF Cyril Favard
DM Delphine Muriaux
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After 24 or 48 hr post-transfection, cell culture supernatants containing Gag-VLPs were collected, filtered through a 0.45 µm filter, and clarified at 800×g for 5 min at 4°C. The supernatant was then purified by loading it on a cushion of 25% sucrose in TNE buffer (25 mM Tris-HCl, 4 mM EDTA, and 150 mM NaCl) and ultracentrifuged at 100,000×g for 1 hr 30 min at 4°C in an SW41Ti rotor (Beckman Coulter). Dry pellets were resuspended in TNE buffer at 4°C overnight. Gag-VLP release was estimated by performing anti-CAp24 immunoblot and by quantifying Gag signal in the blots using Fiji software as described in Thomas et al., 2015. The calculation for Gag-VLP release is: % of Gag in VLP = Gagreleased/(Gagreleased + Gagintracellular normalized to GAPDH).

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