The PDXs were used for preparation of 2 × 2 × 2 mm3 ex vivo tumor tissue explants culture according to a previously published protocol [11]. FFPE blocks were then prepared from the explants using an automated tissue processing machine (Leica Biosystems, Nußloch, Germany) [11,12,13]. Finally, tissue microarray (TMA) blocks were prepared from donor FFPE blocks using 3-mm T-SueTM punch needles (Simport, Beloeil, QC, Canada), with each block containing up to 24 tissue explants.
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