These instructions refer to obtaining fast and low-labour estimates of ground cover, leaf area index and green biomass for a large number of plots, as those encountered in cereal breeding programs. The procedure includes obtaining the pictures in the field and processing them once downloaded to a computer.
Crop Note: The crop must be free of green weeds. The presence of spikes, flowers, etc. on the external part of the canopy may require using a specific calibration curve for that development stage.
Equipment
Conventional digital camera. Note: This is the only equipment required once the method has been calibrated for a range of crops similar to those where it has to be applied. Any commercial camera, compact or reflex, is suitable.
A digital area meter is required for calibrating leaf area index (LAI, e.g. DIAS II, Delta-T Devices)
A drying oven is required for calibrating biomass (e.g. Memmert, model: 800 , minimum precision required: 2 °C)
A precision balance is required for calibrating biomass (e.g. Mettler Toledo, model: PB3002-L , minimum precision required: 0.1 g)
Software
Image processing software that allows quantifying the average colour of the whole picture Note: The program BreedPix 2.0 described in Casadesús and Villegas (2014) is a suitable tool for processing a large number of pictures with the minimal required steps by the user. It can be obtained for free from the authors. General-purpose free software for quantitative image analysis (such as ImageJ or Fiji) can also be used but in this case a macro should be written specifically for this protocol.
Casadesús, J. and Villegas, D. (2015). Simple Digital Photography for Assessing Biomass and Leaf Area Index in Cereals. Bio-protocol 5(11): e1488. DOI: 10.21769/BioProtoc.1488.