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Synteny and Gene Duplication Analysis
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Pair-wise all-against-all BLAST was performed for the D. rotundata protein sequences. The obtained results and the GFF annotation file were then subjected to MCScanX for microsynteny detection and determination of the gene duplication type (Wang et al., 2012). Microsynteny relationships were displayed using TBtools4.
Copyright and License information: ©2020 Zhang, Chen, Sun, Wang, Yin, Liu, Sun and Hang.
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