Preparation of Red Palm Weevil Rhynchophorus Ferrugineus (Olivier) (Coleoptera: Dryophthoridae) Germ-free Larvae for Host-gut Microbes Interaction Studies

Materials and Reagents

1. Perforated plastic bottles (330 ml, 70mm Ø, 107mm height; Jiafeng Horticultural Products Co. Ltd., Chongqing, China)
2. Conical flask
3. Petri dishes (90 mm Ø, Yancheng Huida Medical Instruments Co. Ltd., Jiangsu, China)
4. Paintbrush (1 cm width), used to collect the fresh eggs
5. 0.22 µm syringe filters (Pall Corporation, USA)
6. Spatula (20 cm long and 4 cm wide at the tip)
7. PCR tubes (Biosharp Life Sciences, Hefei, China)
8. 1.5 ml microcentrifuge tubes (Biosharp Life Sciences, Hefei, China)
9. Metal sieve with pore size 60 µm (Sigma-Aldrich Co. Ltd., Switzerland, catalog number: Z289744)
10. Aluminum foil
11. Parafilm (Bemis PM-996, USA)
12. 10 ml sterile syringes (Hamilton^® Syringes, Sigma-Aldrich Co. Ltd., Switzerland)
13. Filter paper (90 mm Ø, Fuyang Special Paper Industry Co. Ltd., Hangzhou, China)
14. Sugarcane, Saccharum sinensis Roxb. (Zhangzhou City, Fujian Province, China)
15. Primers for amplifying the bacterial 16S rRNA gene (27F: 5ʹ-AGAGTTTGATCATGGCTCAG-3ʹ, 1492R: 5ʹ-TACGGYTACCTTGTTACGACTT-3ʹ) (Sangon BioTech. Co. Ltd., Shanghai, China)
16. Trans2K^® DNA marker (Transgene BioTech. Co. Ltd., Beijing, China)
17. Distilled water
18. Ethanol (Sigma-Aldrich, CAS number: 64-17-5)
19. Sodium hypochlorite (NaClO) (Sigma-Aldrich, CAS number: 7681-52-9)
20. Antibiotics
    
    1. Kanamycin (Sigma-Aldrich, CAS number: 70560-51-9)
       
    2. Tetracycline (Sigma-Aldrich, CAS number: 64-75-5)
    3. Gentamycin (Sigma-Aldrich, CAS number: 1405-41-0)
    4. Erythromycin (Sigma-Aldrich, CAS number: 114-07-8)
21. Tryptone (OXOID, catalog number: 2406419)
22. Sodium chloride (NaCl) (Sigma-Aldrich, CAS number: 746398)
23. Potassium chloride (KCl) (CAS number: 7447-40-7)
24. Anhydrous sodium phosphate dibasic (Na₂HPO₄) (CAS number: 7558-79-4)
25. Hydrochloric acid (HCl) (CAS number: 7647-01-0)
26. Monopotassium phosphate (KH₂PO₄₎ (CAS number: 7778-77-0)
27. Yeast extract (CAS number: 8013-01-2)
28. Agar (CAS number: 9002-18-0)
29. Sodium hydroxide (NaOH) (CAS number: 221465)
30. DNA extraction kit (DNeasy blood and tissue kit, Qiagen, Germany)
31. 6x DNA Loading buffer (TRANS^®, Transgene BioTech. Co. Ltd., Beijing, China)
32. 0.5x TAE buffer (Tris-Acetate EDTA)
33. 2x Taq PCR Mastermix (Tiangen Biotechnology, Beijing, China)
34. Tris-HCl (Solarbio Life Sciences Co. Ltd., Beijing, China)
35. Glacial acetic acid (CAS number: 64-19-7)
36. Ascorbic acid
37. Sucrose
38. Casein
39. Corn flour
40. Avicel
41. Cholestrol
42. Choline chloride
43. Inositol
44. Potassium sorbate
45. Sodium p-hydroxybenzoate
46. Disodium EDTA (CAS number: 6381-92-6)
47. Agarose (Transgen. Biotech. Co. Ltd., Beijing, China)
48. TRANS^® Ethidium bromide Gel Stain (Transgen. Biotech. Co. Ltd., Beijing, China)
49. 10x PBS stock solution (see Recipes)
50. Antibiotic stock solution (see Recipes)
51. LB agar medium (see Recipes)
52. 10x TAE stock solution (see Recipes)
53. The artificial food for RPW larvae (see Recipes)
    

Equipment

1. Heal Force safe-1200LC biosafety cabinet (Heal Force Bio-meditech Holdings Co. Ltd., Shanghai, China)
2. Autoclave (Shennan LDZF-75KB-II, China)
3. SCIENTZ-48 tissue lyser (Ningbo Scientz Botecthnology Co., Ltd, China)
4. Haier refrigerator (Haier Co. Ltd., Qingdao, China)
5. Scissors (World Precision Instruments, Sarasota, USA)
6. Pointed tip tweezers (3.9 x 3.0 x 1.0 inches, World Precision Instruments, Sarasota, USA)
7. Forceps with curved flat rounded tips (1.65 mm x 0.05 mm x 120 mm, width x thickness x length, World Precision Instruments, Sarasota, USA)
8. Yiheng^® Incubator (500 x 460 x 800 mm, Shanghai Yiheng Instruments Co. Ltd., China) was employed to rear the axenic larvae (The conditions were set at 37 °C and dark for 24 h)
9. BIO-RAD T100^TM PCR thermocycler (Bio-Rad Co. Ltd., USA) 
10. Eppendorf 5804 R Centrifuge (Eppendorf Co. Ltd., Germany)
11. Gel electrophoresis unit (Liuyi Instruments Co. Ltd., Beijing, China)
12. Nikon^® Stereomicroscope (Nikon Co. Ltd., Japan)
13. Saifu ZRX-260 incubator for maintaining the RPW lab population (260 L, Ningbo Experimental Instrument Co. Ltd, China)
14. Nanodrop 1000 (Thermo SCIENTIFIC, USA)
15. Microwave (Midea Co. Ltd., Guangdong, China)
16. Magnetic stirrer (Ronghua Experimental Instrument Co. Ltd., Jintan, Jiangsu, China)
17. BSA124S Electric balance (Sartorius Co. Ltd., Germany)
18. UV transilluminator (Peiqing Science and Technology Co. Ltd., China)
19. Laminar hood (Heal Force Safe-1200LC)
    

Software

1. IBM SPSS Statistics (22.0)

Procedure

1. Insect rearing and maintaining
   1. RPW lab population was established and maintained by the adults which were trapped in Pingtan District (119°32′ E, 25°31′ N) of Fuzhou City, Fujian Province and Jinshan campus of Fujian Agriculture and Forestry University (119°30′ E, 26°08′ N). RPW individuals were fed with sugarcane stems in the incubator (Saifu ZRX-260, Ninbo Experimental Instrument Co. Ltd., China) at the condition of 27 ± 1 °C, 75 ± 5% relative humidity, and a photoperiod of 24 h dark for larvae and 12 h light/12 h dark for adults (35 mm x 10 mm, length x width, Figure 1).
      
      
      Figure 1. The four different life stages of red palm weevil, Rhynchophorus ferrugineus
      
      
   2. A female and male RPW adult were kept in the perforated plastic bottle. Provide them with sugarcane stem slices (30 mm x 15 mm, length x width) for feeding and oviposition. The food was changed every three days.
   3. The fresh eggs within 12 h after being laid were collected by cutting the sugarcane stem slices into much thinner ones, for dechorionation to generate RPW GF larvae.
      
      
2. Preparation of artificial food and antibiotic stock solutions
   1. Make RPW artificial food (see Recipe 1) and prepare antibiotics stock solutions (see Recipe 2).
   2. Syringe filter (0.22 µm) the antibiotics stock solution and store in aliquots.
   3. Prepare the artificial food in an autoclavable 1 L conical flask and sterilize it using an autoclave for 20 min at 121 °C.
   4. Add the antibiotic cocktail (600 mg/kg, 150 mg/kg each) and 1 g ascorbic acid to the autoclaved artificial food when the temperature drops to about 55 °C.
   5. After solidification, prepare a parallel batch of the artificial diet without antibiotics, replaced by the same volume of sterile distilled water.
   6. After solidification, prepare aliquots of the artificial food in Petri dishes and seal it with parafilm to avoid the potential microbial contamination during changing food for RPW individuals.
      Note: Carry out this step in the biosafety cabinet.
   7. Diet can be stored at 4 °C for later use.
      
      
3. Generating RPW GF individuals via egg dechorionation
   1. Sterilize all the tools, containing paintbrush, metal sieve, spatula (20 cm x 4 cm, length x width), tweezers and forceps, with 75% ethanol.
   2. Turn on the UV light for 30 min to sterilize the surface of laminar hood and other materials inside.
   3. Divide the eggs into two groups: a) non-dechorionated (control group) and b) dechorionated eggs. Use 30 eggs in each group.
   4. For eggs dechorionation, process the dechorionated eggs with the following steps as Koyle et al. (2016):
      
      1. Wash the freshly laid eggs with 10% sodium hypochlorite solution (NaClO) for 3-5 min and then filter them through the metal sieve.
      2. Rinse these eggs two times with 75% ethanol and filter through the metal sieve.
      3. Wash these eggs twice with sterilized distilled water to wash off the bleach (NaClO) and ethanol and filter the water carrying dechorionated eggs through the metal sieve. For the eggs in control group, they are only washed with the autoclaved distilled water and then filter the water carrying eggs through a metal sieve.
   5. Observe the dechorionated eggs under a stereomicroscope and we found that the dechorionated eggs became white as compared to the controls (Figure 2).
      
      
      Figure 2. Non-dechorionated and dechorionated eggs of red palm weevil, Rhynchophorus ferrugineus. (A) Non-dechorionated eggs are only washed with autoclaved distilled water only and (B) dechorionated eggs were washed with 10% sodium hypochlorite solution (NaClO), 75% ethanol and sterilized distilled water.
      
      
   6. Transfer the dechorionated eggs to the sterilized Petri dishes (90 mm Ø) with some UV sterilized moist absorbent cotton inside the laminar hood (Heal Force Safe-1200LC). The eggs are allowed to hatch inside the laminar hood at the condition of 27 ± 1 °C and 75 ± 5% relative humidity in the dark.
   7. Observe the eggs for hatching every 24 h. Two to three days later, they will hatch.
   8. Transfer the neonatal larvae to the new sterilized Petri dishes with 3 g solid artificial diet (Step C6), with or without antibiotics. Refresh the food every two days.
   9. Maintain the RPW larvae at 27 ± 1 °C, 75 ± 5% relative humidity, and 24 h dark photoperiod.
   10. Change the artificial food every three days.
   11. To verify the efficiency of our protocol, four groups are designated here: 1) dechorionated eggs + food with antibiotics, 2) dechorionated eggs + food without antibiotics (DNA), 3) non-dechorionated eggs + food with antibiotics (NDA), and 4) non-dechorionated eggs + food without antibiotics (CR conventionally reared). The larvae in Groups 1 and 3 are maintained in the laminar hood, while two other groups, be served as the positive and negative control, are kept in the incubator (Ninbo Experimental Instrument).
       
       
4. Verification of germfree RPW individuals with culture-dependent and -independent assays
   Gut dissection and homogenization
   
   1. To validate the GF status of RPW, randomly select three larvae (the 5th instar larvae, Figure 3) from each treatment as a replicate for dissection, each group compromised at least three replicates.
   2. To remove the potential effect of associated microbes on the body surface of RPW larvae, submerge the specimens in 10% NaClO for 30 s, 75% ethanol for 90 s and two rinses with sterile distilled water. This step is completed inside the laminar hood.
   3. Dissect the guts under a stereomicroscope using sterilized scissors and forceps in a clean Petri dish with sterile PBS.
   4. Homogenize the collected guts in 1.5 ml microcentrifuge tube containing 1 ml sterile PBS, using a tissue lyser (48 tissue lyser Ningbo Scientz BioTech. Co. Ltd, China).
      
      
      Figure 3. The gut from the fifth RPW larvae
      
      
   Verification of germfree RPW individuals with culture-dependent assays
   
   1. Serially dilute (10^-1-10^-4 fold) the gut homogenate with sterile PBS.
   2. Plate 100 µl diluted homogenate on the LB agar plate in triplicate.
   3. Incubate the plates aerobically at 37 °C for 24 h and then check for the bacterial growth.
   4. As expected, no bacterial colonies appear on the plates containing gut homogenates from the dechorionated eggs provided with food supplemented with antibiotics (Dechorionated eggs + food with antibiotics, Figure 4). However, bacterial colonies grow up on the plates containing gut homogenates from other three groups (Figure 4). Consequently, the evidence suggests that RPW GF larvae were generated successfully.
      
      
      Figure 4. Culture-dependent verification of bacterial growth in the guts of RPW larvae from different treatment cohorts. No bacterial colony is observed in the larvae guts from germ-free (GF) group: dechorionated eggs reared on antibiotic treated food (Dechorionated + food with antibiotic). However, bacterial colonies were found in other three treatment cohorts: DNA (dechorionated eggs + food without antibiotics), NDA (non-dechorionated eggs + food with antibiotics) and CR conventionally reared (non-dechorionated eggs + food without antibiotics).
      
      
   Confirmation of germfree RPW individuals with culture-independent assays
   
   1. The lysed guts in Step D4 (gut dissection and homogenization) were employed to extract the total gut bacteria DNA with DNeasy blood and tissue Kit (Qiagen) following the manufacturer guidelines.
   2. Repeat the final elution twice in 80 µl buffer AE for improving DNA yield.
   3. Quantify the purity and concentration of the extracted DNA by running on 1% gel stained with ethidium bromide and using Nanodrop 1000 (Thermo Scientific, USA).
   4. Prepare the 25 µl PCR reaction system:
      50 ng template DNA
      1 µl of each forward (27F: 5ʹ-AGAGTTTGATCATGGCTCAG-3ʹ) and reverse primer (1492R: 5ʹ-TACGGYTACCTTGTTACGACTT-3ʹ)
      12.5 µl of 2x Taq PCR Mastermix (Tiangen Biotechnology Beijing, China)
      Up to 25 µl with PCR grade ddH₂O
   5. Set up a negative control for PCR by adding 1 µl PCR grade ddH₂O as a template while other reagents remain the same.
   6. Run PCR reactions with the thermal conditions as in Table 1.
      
      Table 1. The thermal conditions of Bacterial 16R rRNA-based PCR assays
      
      
      
   7. Detect the PCR products with electrophoresis on 1% agarose gel. Prepare a 1% agarose gel by dissolving 1.0 g agarose in 100 ml 0.5x TAE buffer and microwave the solution until it has completely dissolved.
   8. Carefully pour the gel solution in an agarose gel cast tray to avoid bubbles formation and let it polymerize for at least 30 min.
   9. Place the gel in the electrophoresis unit filled with 0.5x TAE buffer.
   10. Mix 4 µl of PCR products with 1 µl loading buffer and add to the wells of the gel.
   11. Load 5 µl 2,000 bp DNA marker and run the gel for 30 min at 90 V.
   12. Visualize the gel under the UV light to detect the target band with the expected size of 1,500 bp.
   13. No target PCR band is observed in RPW GF larvae, it presents in other three groups (Figure 5). This result is line with that of culture-dependent method.
       
       
       Figure 5. Verification of gut bacteria-derived PCR products with bacterial 16S rRNA-based PCR assays. GF (Dechorionated eggs + food with antibiotics), DNA (dechorionated eggs + food without antibiotics) NDA (non-dechorionated eggs + food with antibiotics) and CR conventionally reared (non-dechorionated eggs + food without antibiotics).
       
       
5. Conclusion
   Here, we developed a protocol to generate RPW germ-free larvae for further investigation on the interplays between RPW larvae and their associated gut bacteria. This method requires strict sterile conditions, in other words, each step in our protocol should be completed inside the laminar hood. Taken together, following our reported protocol here, RPW GF larvae can be generated from dechorionated eggs which are reared on sterilized artificial food under axenic conditions.
   

Data analysis

Run a One-way Analysis of Variance (ANOVA) to determine the significance in bacterial CFUs across the different treatment groups. Significant differences were determined in the number of bacterial colonies across different cohorts. The guts of RPW individuals from DNA and NDA group were colonized by significantly less bacteria colonies as compared to CR insects (Figure 6).


Figure 6. Quantification of bacterial colony forming units (CFUs) in the guts of RPW larvae from different treatment groups. The number of CFUs of each plate was counted 24 h after incubation at 37 °C. A One-way ANOVA (Tukey’s HSD post hoc multiple comparisons) was run to detect the statistical differences of bacterial CFU across the treatments. The letters indicate significance at P < 0.05. GF (Dechorionated eggs + food with antibiotics), DNA (dechorionated eggs + food without antibiotics), NDA (non-dechorionated eggs + food with antibiotics) and CR conventionally reared (non-dechorionated eggs + food without antibiotics).

Recipes

1. The artificial food for RPW larvae (Table 2)
   
   Table 2. Composition of artificial diet used for RPW rearing
   
   
   
2. Antibiotic stock solution (Table 3)
   
   Table 3. Preparation of antibiotics stock and working concentrations
   
   
   
3. 10x PBS stock solution
   
   1. Prepare PBS stock solution (10x) by dissolving 80 g NaCl, 2 g KCl, 14.4 g Na₂HPO₄, and 2.4 g KH₂PO₄ into 800 ml distilled water in a conical flask
   2. Mix it well on a magnetic stirrer and adjust pH to 7.4 with HCl in a final volume of 1 L
   3. Autoclave the solution for 20 min at 121 °C and store in aliquots at 4 °C
4. LB agar medium
   
   1. Take 5 g tryptone, 5 g NaCl, 2.5 g yeast extract, 7.5 g agar and add it to a 400 ml distilled water. Mix it well in a 1 L conical flask.
   2. Adjust the pH to 7.0 with NaOH in a final volume of 500 ml
   3. Autoclave the media for 20 min at 121 °C
   4. Let the agar cool down to 55 °C and then pour (20 ml) it into sterilized Petri dishes
      
   5. Let it polymerize for about 40 min and then seal it with parafilm
   6. Store the LB agar plates in the fridge at 4 °C
      
5. 10x TAE stock solution
   
   1. Prepare TAE stock solution (10x) by dissolving 48.4 g Tris, 11.4 ml of glacial acetic acid and 3.7 g disodium EDTA in 800 ml distilled water
   2. Stir the solution until dissolved completely and make the final volume 1 L with distilled water. There is no need to sterilize the solution and store it at room temperature

Acknowledgments

We are very indebted to the financial support from National Natural Science Foundation of China (31470656), the National Key Research and Development Project of China (2017YFC1200605) and Natural Science Foundation of Fujian Province (2018J01705).This protocol was modified from our previous work (doi:10.3389/fmicb.2019.01212) which has been published in Frontiers in Microbiology.

Competing interests

The authors declare that they do not have any competing interest.

Ethics

Rhynchophorus ferrugineus individuals are treated according to the standard ethical protocol.

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