联合作者(
Jose A. O'Brien Pontificia Universidad Catolica de Chile
1 protocol
联合评审(
Adam Idoine Carnegie Institution
13 protocols

Agnès Groisillier Sorbonne Universités, University Pierre and Marie Curie
3 protocols

Aksiniya Asenova University of California, Davis
12 protocols

Alexandros Alexandratos National and Kapodistrian University of Athens
14 protocols

编委
Arsalan Daudi
  • University of California
研究方向
  • 植物科学
  • 已发表 protocol 1

Education

Ph.D. in Molecular Plant Biology, Rothamsted Research (Partnership with Monsanto and University of East Anglia), UK, 2007

Current position

Arsalan is an Executive Editor at Bio-protocol. Previously, he was a postdoctoral fellow in the Plant Pathology Department at the University of California, Davis. His research background is in plant-microbe interactions, plant molecular biology, microbiology and genetics.

Publications

  1. Bahar, O., Mordukhovich, G., Luu, D. D., Schwessinger, B., Daudi, A., Jehle, A. K., Felix, G. and Ronald, P. C. (2016). Bacterial outer membrane vesicles induce plant immune responses. Mol Plant Microbe Interact 29(5): 374-384.   
  2. Pruitt, R. N., Schwessinger, B., Joe, A., Thomas, N., Liu, F., Albert, M.,  Robinson, M. R., Chan, L. J. G., Luu, D. D., Chen, H.,  Bahar, O., Daudi, A., Vleesschauwer, D. D., Caddell, D., Zhang, W., Zhao, X., Li, X., Heazlewood, J. L., Ruan, D., Majumder, D., Chern, M., Kalbacher, H., Midha, S., Patil, P. B., Sonti, R. V., Petzold, C. J., Liu, C. C., Brodbelt, J. S., Felix, G. and Ronald, P. C. (2015). The rice immune receptor XA21 recognizes a tyrosine-sulfated protein from a Gram-negative bacterium. Science Advances 1(6): e1500245.
  3. Schwessinger, B., Bahar, O., Thomas, N., Holton, N., Nekrasov, V., Ruan, D., Canlas, P. E., Daudi, A., Petzold, C. J., Singan, V. R., Kuo, R., Chovatia, M., Daum, C., Heazlewood, J. L., Zipfel, C. and Ronald, P. C. (2015). Transgenic expression of the dicotyledonous pattern recognition receptor EFR in rice leads to ligand-dependent activation of defense responses. PLoS Pathog 11(3): e1004809.   
  4. Mammarella, N. D., Cheng, Z., Fu, Z. Q., Daudi, A., Bolwell, G. P., Dong, X. and Ausubel, F. M. (2015). Apoplastic peroxidases are required for salicylic acid-mediated defense against Pseudomonas syringae. Phytochemistry (112): 110-121.
  5. Chen, X., Zuo, S., Schwessinger, B., Chern, M., Canlas, P. E., Ruan, D., Zhou, X., Wang, J., Daudi, A., Petzold, C. J., Heazlewood, J. L. and Ronald, P. C. (2014). An XA21-associated kinase (OsSERK2) regulates immunity mediated by the XA21 and XA3 immune receptors. Mol Plant 7(5): 874-892.
  6. Bahar, O., Pruitt, R., Luu, D. D., Schwessinger, B., Daudi, A., Liu, F., Ruan, R., Fontaine-Bodin, L., Koebnik, R. and Ronald, P. C. (2014). The Xanthomonas Ax21 protein is processed by the general secretory system and is secreted in association with outer membrane vesicles. PeerJ 2: e242.
  7. Daudi, A. and O’Brien, J. A. (2012). Detection of Hydrogen Peroxide by DAB Staining in Arabidopsis Leaves. Bio-protocol 2(18): e263.
  8. O’Brien, J. A., Daudi, A., Butt, V. S. and Bolwell, G. P. (2012). Reactive oxygen species and their role in plant defence and cell wall metabolism. Planta 236(3): 765-779.
  9. Daudi, A., Cheng, Z., O’Brien, J. A., Mammarella, N., Khan, S., Ausubel, F. M. and Bolwell, G. P. (2012). The apoplastic oxidative burst peroxidase in Arabidopsis is a major component of pattern-triggered immunity. Plant Cell 24(1): 275-287.
  10. O’Brien, J. A., Daudi, A., Finch, P., Butt, V. S., Whitelegge, J. P., Souda, P., Ausubel, F. M. and Bolwell, G. P. (2012). A peroxidase-dependent apoplastic oxidative burst in cultured Arabidopsis cells functions in MAMP-elicited defense. Plant Physiol 158(4): 2013-2027.
  11. Cook, C. M., Daudi, A., Millar, D. J., Bindschedler, L. V., Khan, S., Bolwell, G. P. and Devoto, A. (2012). Transcriptional changes related to secondary wall formation in xylem of transgenic lines of tobacco altered for lignin or xylan content which show improved saccharification. Phytochemistry 74: 79-89.
  12. Lowe, R. G., Allwood, J. W., Galster, A. M., Urban, M., Daudi, A., Canning, G., Ward, J. L., Beale, M. H. and Hammond-Kosack, K. E. (2010). A combined 1H nuclear magnetic resonance and electrospray ionization-mass spectrometry analysis to understand the basal metabolism of plant-pathogenic Fusarium spp. Mol Plant Microbe Interact 23(12): 1605-1618.
  13. Kavousi, B., Daudi, A., Cook, C. M., Joseleau, J. P., Ruel, K., Devoto, A., Bolwell, G. P. and Blee, K. A. (2010). Consequences of antisense down-regulation of a lignification-specific peroxidase on leaf and vascular tissue in tobacco lines demonstrating enhanced enzymic saccharification. Phytochemistry 71(5-6): 531-542.
  14. Nakagami, H., Sugiyama, N., Mochida, K., Daudi, A., Yoshida, Y., Toyoda, T., Tomita, M., Ishihama, Y. and Shirasu, K. (2010). Large-scale comparative phosphoproteomics identifies conserved phosphorylation sites in plants. Plant Physiol 153(3): 1161-1174.
  15. Bolwell, G. P. and Daudi, A. (2009). Reactive oxygen species in plant–pathogen interactions. Reactive oxygen species in plant signaling. Springer, 113-133. 
  16. Sugiyama, N., Nakagami, H., Mochida, K., Daudi, A., Tomita, M., Shirasu, K. and Ishihama, Y. (2008). Large-scale phosphorylation mapping reveals the extent of tyrosine phosphorylation in Arabidopsis. Mol Syst Biol 4:193.
  17. Hammond-Kosack, K., Urban, M., Baldwin, T., Daudi, A., Rudd, J., Keon, J., Lucas, J., Maguire, K., Kornyukhin, D. and Jing, H. (2004). Plant pathogens: how can molecular genetic information on plant pathogens assist in breeding disease resistant crops. 4th International Crop Science Congress. 
已发表 protocol 1篇
Detection of Hydrogen Peroxide by DAB Staining in Arabidopsis Leaves
拟南芥叶中过氧化氢的检测(DAB染色法)

作者:Arsalan Daudi and Jose A. O’Brien日期:09/20/2012,浏览量:53466,Q&A: 20
In this protocol, the in situ detection of hydrogen peroxide (one of several reactive oxygen species) is described in mature Arabidopsis rosette leaves by staining with 3,3'-diaminobenzidine (DAB) using an adaptation of previous ...
参审 protocol 19篇
Metabolite Profiling of Mature Arabidopsis thaliana Seeds Using Gas Chromatography-Mass Spectrometry (GC-MS)
采用气相色谱质谱仪(GC-MS)分析成熟拟南芥种子代谢谱
作者:Hagai Cohen, Ifat Matityahu and Rachel Amir日期:11/05/2016,浏览量:5901,Q&A: 0
Metabolite profiling using gas chromatography-mass spectrometry (GC-MS) permits the annotation and quantification of a relatively wide variety of metabolites, covering a wide range of biochemical groups of metabolites. Lisec et al. (2006) ...
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Paper Roll Culture and Assessment of Maize Root Parameters
玉米根系的卷纸培样和参数评估
作者:Adel H. Abdel-Ghani, Darlene L. Sanchez, Bharath Kumar and Thomas Lubberstedt日期:09/20/2016,浏览量:6529,Q&A: 0
Selection for genotypes with a vigorous root system could enhance the adaptation of maize under water and nutrient deficit soils. Although extensive genetic variation for root architecture has been reported (Kumar et al., 2012; Abdel-Ghani ...
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主审 protocol 138篇
Measuring Secretion of Capsidiol in Leaf Tissues of Nicotiana benthamiana
烟草叶组织分泌辣椒素的测定
作者:Teruhiko Kuroyanagi, Maurizio Camagna and Daigo Takemoto日期:08/05/2018,浏览量:1346,Q&A: 0
Plant species produce a wide variety of antimicrobial metabolites to protect themselves against potential pathogens in natural environments. Phytoalexins are low molecular weight compounds produced by plants in response to attempted attacks of ...
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Detecting the Interaction of Double-stranded RNA Binding Protein, Viral Protein and Primary miRNA Transcript by Co-immunoprecipitation in planta
通过免疫共沉淀法检测植物中双链RNA结合蛋白、病毒蛋白和初级miRNA转录产物的交互作用
作者:Lijia Zheng, Chao Zhang, Jianguo Wu and Yi Li日期:05/05/2018,浏览量:1561,Q&A: 0
MicroRNAs (miRNAs) play important roles in plant growth, development, and response to infection by microbes. Double-stranded RNA binding protein 1 (DRB1) facilitates the processing of primary miRNA transcripts into mature miRNAs. Recently, we found ...
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