The collection of 130 pnuC motif representatives reported elsewhere (KI Brewer, EB Greenlee, G Higgs, et al., in prep.) were reduced to 43 unique representatives that were bounded by the nucleotides beginning near the left shoulder of P1 and the start codon. Alignments were manually prepared and analyzed to establish the consensus sequence and structural model. Given the small number of unique representatives, base-pair annotations were made if any evidence of covariation was observed, without statistical analysis.

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