Average block selection using relaxation data
This protocol is extracted from research article:
Solvent-dependent segmental dynamics in intrinsically disordered proteins
Sci Adv, Jun 28, 2019; DOI: 10.1126/sciadv.aax2348

To minimize force field–dependent inaccuracies, we applied our ABSURD procedure as described in (28, 30). Tentatively, we performed the selection for each simulation using each spin relaxation dataset recorded at the simulated temperature. Then, we considered only the selection that yields the lowest global χ2 value, calculated comparing the selected trajectory segments with all the relaxation rates measured at that temperature. The results of this procedure are summarized in table S2.

Note: The content above has been extracted from a research article, so it may not display correctly.



Q&A
Please log in to submit your questions online.
Your question will be posted on the Bio-101 website. We will send your questions to the authors of this protocol and Bio-protocol community members who are experienced with this method. you will be informed using the email address associated with your Bio-protocol account.



We use cookies on this site to enhance your user experience. By using our website, you are agreeing to allow the storage of cookies on your computer.