The newly generated ancient data were merged with a previously described dataset (12) and with additional published datasets (11, 1314, 21, 25, 36). The merged dataset includes 638 published ancient genomes (1114, 21, 25, 36) and 4943 ones belonging to 298 worldwide present-day populations (12, 37) that were genotyped on the Affymetrix Axiom Genome-Wide Human Origins 1 array (38) (“HO dataset”) with a total of 593,124 SNP sites in the merged dataset.

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