The plots in fig. S5 were made by modifications of functions from the “matchSCore” package in R (46). That is, Jaccard indices were calculated comparing all markers for each node with an average log fold change of >1, in every species, to those of each node in every other. Homolog conversion (see above) was performed before testing. The heat map representation of these data was made using the “complexHeatmap” package.

Note: The content above has been extracted from a research article, so it may not display correctly.

Please log in to submit your questions online.
Your question will be posted on the Bio-101 website. We will send your questions to the authors of this protocol and Bio-protocol community members who are experienced with this method. you will be informed using the email address associated with your Bio-protocol account.

We use cookies on this site to enhance your user experience. By using our website, you are agreeing to allow the storage of cookies on your computer.