https://www.ncbi.nlm.nih.gov/pubmed/?term=Anuj+Kumar%2C+Uttarakhand+Council+for+Biotechnology(A) Peer-Reviewed Journals
1. Nagaraju M, Reddy PS, Kumar SA, Kumar A, Rajasheker G, Rao MD, Kavi Kishor PB (2020). Genome-wide cataloguing and transcriptional profiling of small heat shock protein gene family under diverse abiotic stress conditions in Sorghum bicolor (L.). International Journal of Biological Macromolecules. 142:822-834.
2. Kumar A, Sharma A, Gahlaut V, Chaudhary S, Kumar A, Tyagi P, Gajula MNVP, Singh KP (2019). Genome-wide identification, characterization, and expression profiling of SPX gene family in wheat. International Journal of Biological Macromolecules. 140:17-32.
3. Batra R, Agarwal P, Tyagi S, Saini DK, Kumar V, Kumar A, Kumar S, Balyan HS, Pandey R, Gupta PK (2019). A study of CCD8 genes/proteins in seven monocots and eight dicots. PLoS ONE. 14: e0213531.
4. Gautam T, Sripalli G, Gahlaut V, Kumar A, Sharma PK, Balyan HS, Gupta PK (2019). Further studies on sugar transporter (SWEET) genes in wheat (Triticum aestivum L.). Molecular Biology Reports.46: 2327–2353.
5. Nagaraju M, Kumar SA, Reddy PS, Kumar A, Rao MD, Kavi Kishor PB (2019). Genome-scale identification, classification, and tissue specific expression analysis of late embryogenesis abundant (LEA) genes under abiotic stress conditions in Sorghum biocolor L. PLoS ONE. 14: e0209980.
6. Ijaq J, Malik G, Kumar A, Sarathi Das P, Meena N, Bethi N, Sundararajan VS, Suravajhala P (2019). A model to predict the function of hypothetical proteins through nine point classification scoring schema. BMC Bioinformatics. 20:14.
7. Tiwari P, Gupta S, Kumar A, Sharma M,Sundararajan VS, Kothari SL, Mathur SK, Medicherla KM, Malik B, Suravajhala P (2019). Characterizing and functional assignment of non-coding RNAs. Encyclopedia of Bioinformatics and Computational Biology (Oxford: Elsevier). 3: 47-59.
8. Kumar A, Batra R, Gahlaut V, Gautam T, Kumar S, Sharma M, Singh KP, Balyan HS, Gupta PK (2018).Genome-wide identification and characterization of gene family for RWP-RK transcription factors in wheat (Triticum aestivum L.). PLoS ONE. 13: e0208409.
9. Sundararajan VS, Malik G, Ijaq J, Kumar A, Das PS, Shidhi PR, Nair AS, Dhar PK, Suravajhala P (2018). HYPO: A database of hypothetical human proteins. Protein & Peptide Letters. 25: 799-803.
10. Wani SH, Tripathi P, Zaid A, Challa GS, Kumar A, Kumar V, Upadhyay J, Joshi R, Bhatt M (2018). Transcriptional regulation of osmotic stress tolerance in wheat (Triticum aestivum L.). Plant Molecular Biology. 97: 469-487.
11. Kumar A, Sharma M, Kumar S, Tyagi P, Wani SH, Gajula MNVP, Singh KP (2018). Functional and structural insights into candidate genes associated with nitrogen and phosphorus nutrition in wheat (Triticum aestivum L.). International Journal of Biological Macromolecules. 118: 76-91.
12. Kumar A, Pandeya A, Malik G, Sharma M, Kumari H, Kumar AS, Gahlaut V, Singh KP, Gajula MNVP, Suravjahal P, BalyanHS, Gupta PK (2018). A Web-resource for Nutrient Use Efficiency related Genes, QTLs, and microRNA in important cereals and model plants. F1000Research. 7:673
13. Mathpal P, Kumar U, Kumar A, Kumar S,Malik S, Mehra P, Dhaliwal HS, Kumar S (2018). Identification, expression analysis and molecular modeling of Iron deficiency specific clone 3 (Ids3) like gene in hexaploid wheat. 3 Biotech. 8:219
14. Jee B, Kumar S, Yadav R, Singh Y, Kumar A, Sharma N (2018). Ursolic acid and carvacrol may be potential inhibitors of dormancy protein small heat shock protein16.3 of Mycobacterium tuberculosis. Journal of Biomolecular Structure and Dynamics. 36:3434-3443.
15. Kumar A, Kumar S, Kumar A, Sharma N, Sharma M, Singh KP, Rathore M, Prasad Gajula MNV (2018). Homology modeling, molecular docking and molecular dynamics based functional insights into rice urease bound to urea. Proceedings of the National Academy of Sciences, India Section B: Biological Sciences.88:1539-1548.
16. Nagaraju M, Palakolanu SD, Kumar SA, Kumar A, Suravajhala P, Ali A, Srivastava RK, Rao MD, Kavi Kishor PB (2018). Genome-wide analysis of dehydrins in Sorghum bicolor, Setaria italica and Zea mays and their expression under abiotic stress in Sorghum bicolor. Plant Gene. 13: 64-75.
17. Kumar A, Kumar R, Sharma M, Kumar U, Gajula MNVP, Singh KP (2018). Uttarakhand Medicinal Plants Database (UMPDB): A platform for exploring genomic, chemical and traditional knowledge. Data (MDPI). 3: 7; doi: 10.3390/data3010007
18. Aseer KR, Silvester JA, Kumar A, Choi M-S, Yun JW (2017). SPARC paucity alleviates ROS-mediated oxidative stress, apoptosis, and autophagy in diabetogenic hepatocytes. Free Radical Biology and Medicine. 108: 874-895.
19. Kumar A, Kumar S, Kumar U, Suravajhala P, Prasad Gajula MNV (2016). Functional and structural insights into novel DREB1A transcription factors in common wheat (Triticum aestivum L.): A molecular modeling approach. Computational Biology and Chemistry. 64:217-226.
20. Ghalaut V, Jiaswal V, Kumar A, Gupta PK (2016). Transcription factors involved in drought tolerance and their possible role in developing drought tolerant cultivars with emphasis on wheat (Triticum aestivum L.). Theoretical and Applied Genetics. 129: 2019-2042.
21. Balyan HS, Gahlaut V, Kumar A, Jaiswal V, Dhariwal R, Tyagi S, Agarwal P, Pandey S, Gupta PK (2016). Nitrogen and phosphorus use efficiencies in wheat: Physiology, phenotyping, genetics and breeding. Plant Breeding Reviews. 40: 167-234.
22. Gajula MNVP, Kumar A, Ijaq J (2016). Protocol for molecular dynamics simulations of proteins. Bio-Protocol. 6:e2051. DOI:10.21769/BioProtoc.2051
23. Panchangam SS, Vahedi M, Megha MKJ, Kumar A, Raithatha K, Suravajhala P, Reddy PVV (2016). On Saffron’omics’: The challenges of integrating Omic technologies. Avicenna Journal of Phytomedicine. 6:604-620.
24. Kumar A, Rathore M, Singh KP, Tyagi PK, Sharma N (2016). In silico chromosomal mapping and functional annotation of TaPHT1;1 a high affinity phosphate transporter gene in wheat (Triticum aestivum L.). Online Journal of Bioinformatics. 17:180-191.
(B) BOOK’S
1. Singh KP, Kumar A, Kumar U. Medicinal Plants of Uttarakhand; Astral International; New Delhi, India, 2018; (Volume 1-3). ISBN: 9789351249092
(C) HANDS-ON-TRAINING MANUAL BOOK’S
2. Kumar A, Singh KP (2015). Manual of workshop cum hands on training on Recent trends in bioinformatics and its applications in modern biology. UCB, Dehradun.
3. Kumar A, Arya P, Balyan HS, Gupta PK (2015). Manual of workshop cum hands on training on computational identification of MicroRNA (miRNA) for abiotic and biotic stress tolerance in cereals. CCS University, Meerut. DOI: 10.13140/RG.2.1.3087.0009
(D) BOOK CHAPTERS/ PEER-REVIEWED INTERNATIONAL CONFERENCES
1. Kumar A, Ijaq J, Singh KP, Suravajhala P (2015). Insights into human mitochondrial hypothetical proteins: A computational structural biology approach. In Francisco Ortuño Guzmán, Ignacio Rojas Ruiz (Eds.), Proceedings of 3rd International Work-Conference on Bioinformatics and Biomedical Engineering (IWBBIO–2015): Pp: 93-107, April 15-17, Granada, Spain. ISBN: 978-84-16292-17-2
2. Gajula Prasad MNV, Steinhoff HJ, Kumar A, Kumar AP, Siddiq EA (2015). Displacement of the tyrosyl radical in RNR enzyme: A sophisticated computational approach to analyze experimental data. In Fahad Saeed, Nurit Haspel (Eds.), Proceedings of International Conference on Bioinformatics and Computational Biology (BICOB–2015): Vol. 7:211-219, March 9-11, Honolulu, Hawaii, USA: The International Society for Computers and Their Applications (ISCA). ISBN: 978-1-5108-0013-7
3. Gajula Prasad MNV, Kumar A, Siddiq EA, Polumetla (2015). Role of bioinformatics in agriculture. In Singh TVK, Ramanjaneyulu AV, et al. (Eds.), Proceedings of 2nd International Conference on Bio-Resource and Stress Management (ICBSM-2015), Pp: 230-235, January 7-10, Hyderabad, India. ISBN: 978-81-920073-8-0